Insertion junction: CLIP2.051952_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051952
Chromosome:chromosome 3
Location:9071978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202001 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCAGCCGGCCCACCACACCGCTGCGGCTGCAACTGGCGCAACAGGGG
Internal bar code:TATGTACTTGCGCTCACGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:79
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTACATATCGGGCGCAC
Suggested primer 2:CCGTATCAATGTCGGCCCAA