Insertion junction: CLIP2.051965_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051965
Chromosome:chromosome 5
Location:2314016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238260 (1 of 1) PF13371//PF13414//PF13432 - Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) // Tetratricopeptide repeat (TPR_16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCCCTGGTCCCTGGTCCCTGGTCCCTGTCCCTGGTCCCTGTCCCTGG
Internal bar code:GTTTTGGGGCCCCGTTCTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2119
LEAP-Seq percent confirming:68.6274
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGGACCAGGGACCA
Suggested primer 2:CGTCAAACACACACCGACAC