Insertion junction: CLIP2.051965_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051965
Chromosome:chromosome 5
Location:2314020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238260 (1 of 1) PF13371//PF13414//PF13432 - Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) // Tetratricopeptide repeat (TPR_16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGGGACCAGGGACCAGGGACAGGGACCAGGGACCAGGGACCAGGGAC
Internal bar code:CAGGTGCTTAGCAGTAAGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:908
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAAACACACACCGACAC
Suggested primer 2:GACCAGGACCAGGGACCA