Insertion junction: CLIP2.051968_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051968
Chromosome:chromosome 13
Location:4134865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591200 HTB38,HTB22 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCTAAGAAGGCTGCCAAGGAGGGCGGCGACGGCGAGAAGGGCGACA
Internal bar code:CAGGGTATCGAATTCCCTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2440
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTAGCCCGAGGTGAACT
Suggested primer 2:GGAGGCTCTTGTGACCTTCC