Insertion junction: CLIP2.051979_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051979
Chromosome:chromosome 10
Location:5780950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g460100 (1 of 24) IPR001680//IPR017986//IPR020472 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAATTGTGTGTTTGTGTGTCAGAGAGGGAGGGAGGGAGGAAGCATAGC
Internal bar code:AGTGCGATTGCACTGGGTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGCGGGAATGAAGCAG
Suggested primer 2:TCCTCTTCCTCACCCTCCTG