Insertion junction: CLIP2.051989_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051989
Chromosome:chromosome 6
Location:1463187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260350 DNJ6 (1 of 1) PF00226//PF14308 - DnaJ domain (DnaJ) // X-domain of DnaJ-containing (DnaJ-X); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAATTCACTGCTTGCCGCCGTATCCTGCAGGCCGAGGCTGGCGGCGC
Internal bar code:GGACCGAAGTAATGGGCTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGGAAGCGCATGTGTGT
Suggested primer 2:AGTAGAAGCTGCTGCACCAG