Insertion junction: CLIP2.051999_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051999
Chromosome:chromosome 11
Location:778942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467632 (1 of 1) IPR008979//IPR017853 - Galactose-binding domain-like // Glycoside hydrolase superfamily CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCAGGCGCCAACCGCTGCGCCCACCTCCGTCACCGTGAATGCGGCAC
Internal bar code:AAATAGACAATGGCCAAATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4029
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCCTCTCCTGGATCCAC
Suggested primer 2:GTACACCTTGGACCAGTCGG