Insertion junction: CLIP2.052001_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052001
Chromosome:chromosome 10
Location:4984586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454300 (1 of 1) IPR003613//IPR011009 - U box domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGCATGTGAAGGGCCTTGGCGGCGTGTGTGGGCAGGGCGGCCCGCG
Internal bar code:TTACCAATCTCTTGGGACTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3841
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACTGTACGTTTCGGGTC
Suggested primer 2:TGGGAAGGCGTAAACACTCC