Insertion junction: CLIP2.052003_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052003
Chromosome:chromosome 2
Location:4477388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106450 LCA1 (1 of 1) PTHR11440//PTHR11440:SF4//PTHR23070//PTHR23070:SF14 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED // PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE // BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED; AAA ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAACTTGGCCAAGACCGCATGCCTGCCGTGCCGCCTCGCGCCCTGGGG
Internal bar code:CCGGGACGGTAGTGGATTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2402
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCTGCTTGCACACCAC
Suggested primer 2:CTTGTTTTGAGGGTTGGGCG