Insertion junction: CLIP2.052006_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052006
Chromosome:chromosome 17
Location:444603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698903 (1 of 1) IPR000014//IPR002395 - PAS domain // HMW kininogen intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCCGCAAAAAGCCTGGAACCCCCCCTCGGGCGATCGACGAACGACCT
Internal bar code:CTAGATTAACCCTTCAATCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1776
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAAATGCGGCTGGTTCA
Suggested primer 2:TACGCAACCATCCTGCTCAG