Insertion junction: CLIP2.052006_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052006
Chromosome:chromosome 17
Location:444603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698903 (1 of 1) IPR000014//IPR002395 - PAS domain // HMW kininogen intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGACTACCGGGGTCGACGCGGCTACAAGACGCTCGGTATCGGTAGGT
Internal bar code:AGTGCATAATGCGACAGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCAACCATCCTGCTCAG
Suggested primer 2:CAACAAATGCGGCTGGTTCA