Insertion junction: CLIP2.052007_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052007
Chromosome:chromosome 9
Location:5091109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406250 (1 of 1) IPR002893//IPR008930 - Zinc finger, MYND-type // Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGACTTGTATCTGCGCATACACGGACTGCGCCAGCAAGGTAGCAAGG
Internal bar code:GATCCTTCCGAAGGTGCACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAACACAATTGACAGCA
Suggested primer 2:ATTCGTCAGGGCATCGGTTT