Insertion junction: CLIP2.052011_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052011
Chromosome:chromosome 12
Location:5683125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532000 (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGGTGCTGGAAGGCCCTTGCAAACCGCTCCCTGCTTACCTTGCCCG
Internal bar code:TATTAGTCATCATGATTAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTTTATCCAGTTGCTC
Suggested primer 2:ATTGCACGTTTGACACAGCC