Insertion junction: CLIP2.052029_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052029
Chromosome:chromosome 9
Location:1070210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTGGCCTTTTCCTGCAGCGCGGGTGAGGGGGAGCGAGGGAGAGAGGG
Internal bar code:TCGCCGCTATAATAGCTTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1547
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACTCCTAGCAGCAGGC
Suggested primer 2:GGGGTTCGTCGTCCATGAAT