Insertion junction: CLIP2.052035_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052035
Chromosome:chromosome 7
Location:477235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315550 (1 of 2) IPR005654//IPR027417 - ATPase, AFG1-like // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGTTTCCAGCCGCCACCAGTGGCACTGCTGCCCTCACACCCCCTTGC
Internal bar code:GAAGCCAGGTTGTAGCTCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1025
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTTCTTCTCGTTCAGCC
Suggested primer 2:GCAGCTTGGCTAACGCATAC