Insertion junction: CLIP2.052036_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052036
Chromosome:chromosome 4
Location:2586294
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222700 ABC4,EF3 (1 of 2) K03235 - elongation factor 3 (EF3, TEF3); Elongation Factor 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTTGCCCTCCATTACAGCTCCTCTCCCGACACGCCTGCTCCTGCTCC
Internal bar code:GTCAGAGCAGTGCAATGCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2705
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGTCGACCCTGATCAA
Suggested primer 2:AGCACGACCTTCACCTTCTG