Insertion junction: CLIP2.052037_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052037
Chromosome:chromosome 2
Location:5651015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115700 intron
lncRNA_TCONS_00042975 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGAACCTTCCGCAAGCAGCTAGTCCTTACAACACCGCACGTACCATC
Internal bar code:CTTGTTAAATATCTCCAATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4059
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCGGGAAGAGGTAATCG
Suggested primer 2:TATACTACCCACACCGCCCA