Insertion junction: CLIP2.052044_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052044
Chromosome:chromosome 17
Location:3282939
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g722050 (1 of 1) K19202 - histone deacetylase complex subunit SAP30 (SAP30) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCAACAGCAAGCGCAGAAGGGCATGCCAGGCTCCAAAACCACCTGG
Internal bar code:GAGGTATCTAGTTAACCACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1922
LEAP-Seq percent confirming:17.0732
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACTTCGGGAAGCTGGAC
Suggested primer 2:CCGTTCAAAAATGCCCGTGT