Insertion junction: CLIP2.052046_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052046
Chromosome:chromosome 10
Location:1231432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426350 predicted protein; (1 of 2) 5.2.1.14 - Beta-carotene isomerase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCCACTGGCAGGTCATGGCTGTGGCCAAGGCGTTCAGGCGGCAGGAG
Internal bar code:GATGCTTCCTCAGAGGTTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2005
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGACACAGGAAGCCACTC
Suggested primer 2:CTTGCGCACTCCGATGAATG