Insertion junction: CLIP2.052049_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052049
Chromosome:chromosome 5
Location:543220
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244400 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTATGTGCGCCCCGCACCATCTTATACCGCCGGGAGGCTGCTTGCCAC
Internal bar code:CTGTCAGGTAATTGAGCCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3002
LEAP-Seq percent confirming:96.5909
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGACTGGACATCGTGTTC
Suggested primer 2:GGGACATTGCCCGTAGTCAA