Insertion junction: CLIP2.052055_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052055
Chromosome:chromosome 2
Location:5216584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112250 CAL2 (1 of 1) 3.4.22.53//3.4.22.54 - Calpain-2 / Milli-calpain // Calpain-3 / Muscle-specific calcium-activated neutral protease 3; Calpain family cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAAGCTCACACAAGCACACGTAGGATAGGGCCAAACGTGTGCTTGCT
Internal bar code:TATTGTCGTAGTACGGGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCCGGCTTGTGCAAATG
Suggested primer 2:TGCCAGCCCTAACTCCAATG