Insertion junction: CLIP2.052063_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052063
Chromosome:chromosome 16
Location:1514340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATTAACTTTAATATTTTAGGGGGTCAAGGCAATGGGGGCGCTTGCGC
Internal bar code:AAGTAAAAACATTGATGCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3481
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATGGCTAGCGTCATCGT
Suggested primer 2:GCGCTTCTGCTTGTGTGAAA