Insertion junction: CLIP2.052066_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052066
Chromosome:chromosome 17
Location:3260439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721850 SSA16 cilia-sensing, structure and/or assembly; (1 of 1) K08292 - elongation factor 2 kinase (EEF2K) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACCCGCATCCGCTCACGCTCACGCTCAAGCTCACGCGCACGCACACG
Internal bar code:TTAAGTCAACCTACGGTCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3380
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCTCGTTGGATGAGCAC
Suggested primer 2:ACACAGGCTTACCCGACATG