Insertion junction: CLIP2.052066_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052066
Chromosome:chromosome 17
Location:3260451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721850 SSA16 cilia-sensing, structure and/or assembly; (1 of 1) K08292 - elongation factor 2 kinase (EEF2K) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGGATGCGGATGCGGATGCGGATGCGGATGCGGATGCGGATGCGGA
Internal bar code:TTAAGTCAACCTACGGTCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGGCTTACCCGACATG
Suggested primer 2:TGGTCTCGTTGGATGAGCAC