Insertion junction: CLIP2.052067_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052067
Chromosome:chromosome 3
Location:3836323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170150 (1 of 2) PTHR10857//PTHR10857:SF0 - COPINE // PROTEIN GEM-4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTCTGTGCTCAGCTCCACCCAACCCAGCGGCCGGTGAGACCCGTTT
Internal bar code:ACGTAACATCTCTAGTCCCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCGCATACCTGCTACTG
Suggested primer 2:GCAGACAGACCCTCAGACAC