Insertion junction: CLIP2.052070_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052070
Chromosome:chromosome 4
Location:3106538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225750 (1 of 1) K18550 - IMP and pyridine-specific 5'-nucleotidase (ISN1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATTACTTGAGAAGTGAAGGCGTAGCCAGGTATAGTAGTATAGCAGG
Internal bar code:CGATTCCACTCGGACGGTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:530
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAATACATCCCGCCCAAC
Suggested primer 2:GGCTTGAACCAAACCGACAC