Insertion junction: CLIP2.052078_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052078
Chromosome:chromosome 12
Location:7235337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558950 (1 of 1) IPR000104//IPR009071 - Antifreeze protein, type I // High mobility group box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTCACAGGGCTGACCGTATGTGTTTACATGTGTACATGAGTAGAGA
Internal bar code:CAGGAGGCCTGAATTAACTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:511
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCACACGTACACCTGACACG
Suggested primer 2:TTCCGATCCAAATGACCGCA