Insertion junction: CLIP2.052078_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052078
Chromosome:chromosome 12
Location:7235343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558950 (1 of 1) IPR000104//IPR009071 - Antifreeze protein, type I // High mobility group box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACCGTAAGCAGCGGCACCGCCCGCCCCGCCCCGCCGTACCTCGTACT
Internal bar code:TTTACGACGTAATAGTGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4404
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGATCCAAATGACCGCA
Suggested primer 2:TCACACGTACACCTGACACG