Insertion junction: CLIP2.052080_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052080
Chromosome:chromosome 2
Location:1723466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086076 (1 of 1) PTHR33524//PTHR33524:SF1 - FAMILY NOT NAMED // SET DOMAIN-CONTAINING PROTEIN 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGAGCGGGGTTGGTATGGGGGCTCAACCTGTGTCGTATTGCTCGCC
Internal bar code:AGTCAGCGGTTGGTCGTTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTACACACACACGGTCA
Suggested primer 2:AGGTGGATGCTTGTCTGTGG