Insertion junction: CLIP2.052081_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052081
Chromosome:chromosome 3
Location:1971882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155550 DNJ18 (1 of 1) IPR001623//IPR012336 - DnaJ domain // Thioredoxin-like fold; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCTTGGGCGGTGTTGTGCGGCCCGGCTGCCAGTGGCAGACGCGGCA
Internal bar code:ATTGCAATTTCATTGCAGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGCGGTTCAAATCAAT
Suggested primer 2:AACGACACGAACGACTCCTC