Insertion junction: CLIP2.052082_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052082
Chromosome:chromosome 16
Location:5809603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680050 DRT2 DRAP1-like protein; (1 of 1) PTHR10252:SF5 - DR1-ASSOCIATED COREPRESSOR CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGGCGGACGGGCTTGGAAGTTCGGGGCCTAGCACAACCGCGCTGTC
Internal bar code:CTTTTACAGCATAAGGGGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1486
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCTGCTGTACCCCCTCT
Suggested primer 2:CAAGGGAAAGAACCTGGGGG