Insertion junction: CLIP2.052083_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052083
Chromosome:chromosome 13
Location:1157651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569600 (1 of 5) PF03992 - Antibiotic biosynthesis monooxygenase (ABM) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCCCACGCCTCGCCCCCCTCTCCTTCCTTCCTTCCTTCTTTCCTTG
Internal bar code:TCGGATAGACACTCCCTATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGAAGATGGCAGTGGGGG
Suggested primer 2:GGATAGCAAGTCCTCCGAGC