Insertion junction: CLIP2.052087_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052087
Chromosome:chromosome 2
Location:7343192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391726 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTGCAAAAGGGTTGGTGGGTCAAGGGGCATGAGCGCATTGCGAATG
Internal bar code:CGATCTAGCCTAGAAGCTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTGAGGACTTCGCGATG
Suggested primer 2:TGTCGGTGTAGCGACGAAAA