Insertion junction: CLIP2.052088_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052088
Chromosome:chromosome 16
Location:5845207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679800 (1 of 2) PTHR17630//PTHR17630:SF43 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACGATGTAAAGGCTCGCAGGGGAAGCTCCGTCCGAGCAGACCCCGAC
Internal bar code:GGATTTGACTTACCGCTTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1058
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATTGGGTTGGAGAGGGG
Suggested primer 2:CATGCTGGTTTGAAAGCGCT