Insertion junction: CLIP2.052089_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052089
Chromosome:chromosome 1
Location:6085784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043050 SNR2 SNARE-associated Golgi protein; (1 of 2) PTHR12677:SF5 - TVP38/TMEM64 FAMILY MEMBRANE PROTEIN YDJX CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGTAGCGATGCTGTTGTTGTGGGCTGGTTACTGGGCTGTTCTTGCGG
Internal bar code:TTGTTGTGCAACGGTTTCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2128
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACTTTCCACGTTTGCAC
Suggested primer 2:CATGCGCAATAGTGGACTGC