Insertion junction: CLIP2.052098_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052098
Chromosome:chromosome 12
Location:3833136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514950 CGLD17,HEL53 (1 of 1) PTHR12873//PTHR12873:SF0 - T7-LIKE MITOCHONDRIAL DNA HELICASE // TWINKLE PROTEIN, MITOCHONDRIAL; Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGATGGCTGAATGGCGGGAGAGCGGGCAGGACGTTGTGTTGTGTTGT
Internal bar code:CGATCTGCCTCCCAATGTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1684
LEAP-Seq percent confirming:84.7458
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCGTCGACAAGAAATAC
Suggested primer 2:GGAGGAAGAGGAGGAGGAGG