Insertion junction: CLIP2.052110_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052110
Chromosome:chromosome 16
Location:7002825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673169 (1 of 3) PF03942 - DTW domain (DTW) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTAATGCACGCAGCCGGCCGCCCCGCGTTTGCGTCTGCCCGGCTCTG
Internal bar code:AATCGCTAGAGGTTGGGACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2959
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATCACTCATCAGTCGCG
Suggested primer 2:TTGCTGTCATCGGCTGTCAT