Insertion junction: CLIP2.052111_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052111
Chromosome:chromosome 12
Location:4270256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518350 CYG18 (1 of 2) IPR001054//IPR029016//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // GAF domain-like // Nucleotide cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGCGAGCCGACGCCTACAACAGGTGGACGTGGCTCATCTCCGTTTT
Internal bar code:CATGCCGAAATTTGGCAATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGATGGTCGCGTAGATG
Suggested primer 2:TGACAACTTGCGGCATTTGG