Insertion junction: CLIP2.052113_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052113
Chromosome:chromosome 6
Location:5530601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286750 (1 of 2) PF15247 - Histone RNA hairpin-binding protein RNA-binding domain (SLBP_RNA_bind) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGCGGTCAACGGATGACTCGGTCAACGAGCTCGGACCCGTGGCACGT
Internal bar code:GTGGCGTAAACTTTGTGAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGGACAAGCGAGTTGG
Suggested primer 2:GCTTGTTCCTGCATGCAACA