Insertion junction: CLIP2.052116_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052116
Chromosome:chromosome 5
Location:889132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246400 (1 of 1) 2.3.1.5 - Arylamine N-acetyltransferase / Arylamine acetylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCGGTATATTACAATTCGCAGTCTGTAACGTGACTGCAGACGGGTCT
Internal bar code:GTGATGGGGCTGTCTCCCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1560
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGTGTTTAGCTGTGCC
Suggested primer 2:TCCTCACCACGTACCAGCTA