Insertion junction: CLIP2.052116_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052116
Chromosome:chromosome 6
Location:4726921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279300 (1 of 1) 2.7.10.1//2.7.10.2//2.7.11.1 - Receptor protein-tyrosine kinase / Receptor protein tyrosine kinase // Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTGCAAGGCAGTAACTCCAAATCAGCTTGGTGATAGGGCAAGGAGCC
Internal bar code:CTTGGCTTAAAGTGCTGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:144
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:144

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTGCGCTGATAGCATG
Suggested primer 2:GCGGCGTGGTAATCGTTTAC