Insertion junction: CLIP2.052117_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052117
Chromosome:chromosome 9
Location:3761250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397512 HSPBP1 hsp70-binding protein 1; (1 of 1) K09562 - hsp70-interacting protein (HSPBP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCCGTGCCGCCAGCCAGCGCCGCGCTGCGGTGTCGCCACGCCCCCCC
Internal bar code:ATACCAAATCGGGCTACGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1581
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCTTTAGAACCCCGGG
Suggested primer 2:GTAACCCTTGAGCGCCTCAT