Insertion junction: CLIP2.052122_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052122
Chromosome:chromosome 10
Location:5603688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458350 SRR16 (1 of 1) PTHR22803//PTHR22803:SF55 - MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED // C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 162; Scavenger receptor cysteine rich (SRCR) protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACGTTAGCGACCTGTGCTGACGAGGATGGCGTAGCGGGCAGTCGGCT
Internal bar code:TGTTGTGTATCCGTGACAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1786
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CATACGAAAGCATGTGCCGG
Suggested primer 2:GTATGGACAGCGGAGGATGG