Insertion junction: CLIP2.052127_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052127
Chromosome:chromosome 2
Location:923954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079150 (1 of 1) PF03031//PF13671 - NLI interacting factor-like phosphatase (NIF) // AAA domain (AAA_33) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTACGCACCAGCACAGCAGCAAGCACCGCTGCCAATCAGCGACCCCCC
Internal bar code:GGGCCAGGGCGCATTGTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3214
LEAP-Seq percent confirming:84.9057
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCGCCCTCTATCACCA
Suggested primer 2:CCTTTCAACTGCTGTGCACC