Insertion junction: CLIP2.052132_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052132
Chromosome:chromosome 3
Location:7553306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGGGCCCGGATGGCCGCCGCCTCCCTCGCCCCCCGCCTTTCCTTCAC
Internal bar code:AGGGGGTACTAGAGGGTCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2742
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTACGAACAGTGAGGT
Suggested primer 2:AGGTGGCTGGGTTGATAACG