Insertion junction: CLIP2.052136_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052136
Chromosome:chromosome 13
Location:2671320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581400 NNT1,AAA2 Plastidic ADP/ATP translocase; (1 of 2) PTHR31187//PTHR31187:SF1 - FAMILY NOT NAMED // ADP,ATP CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACCTGCATCCCCCAGTGCAGGATGGAGATGATGATGCCGTTGAGGAC
Internal bar code:GATCCTTGTCATTCTGGACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCAATCAACCTCAGTCC
Suggested primer 2:CCACTCCGCTGTCAGAACAT