Insertion junction: CLIP2.052141_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052141
Chromosome:chromosome 6
Location:3034347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGGGTAGTCGTCATCGTCCGTACCGGTATGCAGGGCGCCTTGCAGA
Internal bar code:TGGACTGTCCGTTGCCCTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCTCCCTCTGCTGCCT
Suggested primer 2:CTACCACGCAAACAAACGCA