Insertion junction: CLIP2.052143_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052143
Chromosome:chromosome 3
Location:5324312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCCGCCACACGGGCGCCGTAGGTGAGTGCGGCCAGCGTCGCGTCAC
Internal bar code:GTATCGGCGCTCGTAGTACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1593
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAGGCAAGGGCTCTGGTG
Suggested primer 2:GTGCTCCGAGTGGTTGATGA