Insertion junction: CLIP2.052153_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052153
Chromosome:chromosome 15
Location:4558098
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAAACCGGCTGCAAGGCAAGGCCTCAGGGGTCACTTATTGGGTTTGG
Internal bar code:GCGCTGCGTCGCGTTGCGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2015
LEAP-Seq percent confirming:35.8491
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGATGGATGCGAGTTTC
Suggested primer 2:GCGGCTTATGTGCTTACTGC