Insertion junction: CLIP2.052154_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052154
Chromosome:chromosome 6
Location:8017920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304800 (1 of 1) PTHR11216//PTHR11216:SF61 - EH DOMAIN // GH06923P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCGGCAAGCCCGAACGCAGGAAAAAGTTGACAGCTTCCGCTCCTCC
Internal bar code:TACCCGGTTTACGGGTAGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGCGGTGTATCCAAGG
Suggested primer 2:GTGTAGCAGGTGGGAGGTTC